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Version: v0.0.8

Tolerance & the warning model

Real scanners and archives emit objects that deviate from the letter of the standard in documented, recoverable ways: odd-length values with no padding, a missing preamble, an off-spec VR, a group-length that disagrees with reality. @cosyte/dicom follows Postel's Law: the parser is liberal (it recovers and records a stable-coded warning), and the serializer is conservative (it always emits spec-clean Part 10). A recoverable quirk is never a silent change and never a throw.

Two tiers plus a small fatal set

  • Recoverable deviations → a warning. The parser recovers, keeps the data, and appends a DicomParseWarning to ds.warnings carrying a stable code and the byte offset where it occurred. There are 25 such codes today (e.g. DICOM_ODD_LENGTH_VALUE_PADDED, DICOM_MISSING_PREAMBLE, DICOM_VR_MISMATCH, DICOM_FILE_META_GROUP_LENGTH_MISMATCH).
  • Unrecoverable structural corruption → a throw. Only four Tier-3 conditions throw a typed DicomParseError: NOT_DICOM_PART_10, INVALID_FILE_META, UNSUPPORTED_TRANSFER_SYNTAX, and EMPTY_INPUT. Everything short of "these bytes are not a readable Part 10 object" is a warning.
import { parseDicom, WARNING_CODES } from "@cosyte/dicom";

// Synthetic object with the 128-byte preamble omitted: a recoverable quirk.
const buf = Buffer.from(
"AgAAAFVMBAAcAAAAAgAQAFVJFAAxLjIuODQwLjEwMDA4LjEuMi4xAAgAYABDUwIAQ1QQACAATE8GAE1STi00Mg==",
"base64",
);

const ds = parseDicom(buf);

// It parsed. The data is intact...
ds.series.modality; // => "CT"
ds.patient.id; // => "MRN-42"

// ...and the deviation is recorded, not hidden.
ds.warnings.map((w) => w.code); // => ["DICOM_MISSING_PREAMBLE"]
ds.warnings[0]?.code === WARNING_CODES.DICOM_MISSING_PREAMBLE; // => true
typeof ds.warnings[0]?.position?.byteOffset; // => "number"

Fatal input throws a typed error

An unreadable object throws DicomParseError, whose .code is one of the four fatal codes. Narrow on it with err instanceof DicomParseError:

import { parseDicom, DicomParseError, FATAL_CODES } from "@cosyte/dicom";

let code: string | undefined;
try {
parseDicom(Buffer.alloc(0)); // no bytes at all
} catch (err) {
if (err instanceof DicomParseError) code = err.code;
}

code; // => "EMPTY_INPUT"
code === FATAL_CODES.EMPTY_INPUT; // => true

What a diagnostic carries, and what it does not

A Tier-2 warning's message is not composed from the document. It is looked up in a frozen registry keyed by the warning code, and the only substitutions are structural: a tag this parser composed from the element header's four bytes, a VR checked against the closed 34-VR set, and input-derived numbers (a declared length, a byte count, a value index). No factory takes a string read out of the file, so a value cannot be interpolated even by a future call site that tries. A token that fails its check renders as <withheld> rather than being echoed.

So w.code and w.position are safe to log, and so is w.message.

A DicomParseError is different, and this is the one to read carefully. It carries a snippet: up to 16 bytes of the source rendered as hex, attached so a structural failure is debuggable. Those are raw input bytes. On a real clinical file they can be part of a patient name or an identifier, and the library does not redact them. Log err.code, err.byteOffset and err.message; treat err.snippet as PHI and redact it at your own boundary if your compliance posture requires it. (The one exception is deliberate: for UNSUPPORTED_TRANSFER_SYNTAX the snippet slot carries the dictionary's name for the UID when PS3.6 publishes one, which is a constant, not input.)

The model fields that are bounded, and the ones that are values

A downstream package that reads this model and builds its own diagnostics from it needs to know which strings are identifiers this parser composed and which are bytes the sender wrote. These are identifiers, with the bound each one actually has. One of them is a length rather than a membership test, and its row says so:

FieldBound
Element.tagComposed here: eight uppercase hex digits from the header's four bytes.
Element.vrTwo bytes, taken from the wire as-is. Checked against the closed 34-VR set only where a message renders it, so a non-conformant sender's two bytes do reach this field (Postel's Law: the on-wire VR is trusted). Two bytes is a hard length bound, not a membership one.
Element.privateCreatorThe active Profile's private dictionary must name it, or it reads <withheld>. With no profile, nothing is recognized. It is populated only from a block reservation made in the element's own Data Set, so it is undefined on a private element in a Sequence Item that claimed no block.
Element.specificCharacterSetPS3.3's closed defined-term table must name it, or it reads <withheld>. The exported parseSpecificCharacterSet bounds its results the same way.
FileMeta.transferSyntaxUIDOne of exactly four literals: any other value is a fatal, so no parsed dataset carries one.
FileMetaRawElement.tag / .vrAs above.
DeidentifiedAttribute.tag / .keyword / .action / .applied / .contextPath / .repeatingGroupComposed from the Part 6 and Annex E tables plus a structural TAG[index] chain.
DeidentifyReport.removedPrivateTags / .retainedTags, and the option names you passed in.
EmbeddedAttributeFinding.tag / .vr / .hidden / .contextPathComposed. hidden holds tags this parser built from four bytes each, and the bytes were sitting inside a value - so they are re-composed as Tag here, never echoed.
UnauditableSequenceFinding.tag / .byteLength / .contextPathComposed, plus one input-derived number: byteLength is the size of the value that was dropped, never any of its bytes.

Everything else on the model is a value, and carries whatever the file carried: Element.rawBytes, Element.value, FileMeta.mediaStorageSOPClassUID, .mediaStorageSOPInstanceUID, .implementationClassUID, .implementationVersionName, .sourceApplicationEntityTitle, .fileMetaInformationVersion, FileMetaRawElement.value, and the keys of DeidentifyReport.uidMap (the source UIDs, kept so replacement stays consistent across a study). Treat those as PHI. They are what the parser is for.

See Troubleshooting for the full symptom table and the logging posture.

Escalate when you want strictness

The tolerance posture is not fixed. A source profile can escalate chosen warning codes to a thrown error (a stricter gate for a trusted sender) or suppress benign, high-volume codes for a known-quirky source, without ever loosening a correct decode. The built-in profiles.strict and profiles.lenient are the two ends of that dial.